LOC_Os03g10780.1


Description : DNA repair endonuclease (XPG)


Gene families : OG_01_0006764 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006764_tree ,
OG_02_0008519 (LandPlants) Phylogenetic Tree(s): OG_02_0008519_tree ,
OG_03_0009700 (SeedPlants) Phylogenetic Tree(s): OG_03_0009700_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10780.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00019230 evm_27.TU.AmTr_v1... DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G28030 UVR1, UVH3 5'-3' exonuclease family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020544.9 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre10.g429050 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032508001 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_23486 No alias DNA repair endonuclease (XPG) 0.02 Archaeplastida
MA_5532g0010 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g18320.1 No alias DNA repair endonuclease (XPG) 0.04 Archaeplastida
Pp3c11_24040V3.1 No alias 5\-3\ exonuclease family protein 0.08 Archaeplastida
Solyc02g067670.4.1 No alias DNA repair endonuclease (XPG) 0.04 Archaeplastida
AMTR_s00026p00019230 evm_27.TU.AmTr_v1... DNA repair protein UVH3 OS=Arabidopsis thaliana 0.02 LandPlants
AT3G28030 UVR1, UVH3 5'-3' exonuclease family protein 0.03 LandPlants
GSVIVT01032508001 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.04 LandPlants
MA_5532g0010 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana... 0.02 LandPlants
Mp2g18320.1 No alias DNA repair endonuclease (XPG) 0.02 LandPlants
Pp3c11_24040V3.1 No alias 5\-3\ exonuclease family protein 0.06 LandPlants
Solyc02g067670.4.1 No alias DNA repair endonuclease (XPG) 0.03 LandPlants
AT3G28030 UVR1, UVH3 5'-3' exonuclease family protein 0.03 SeedPlants
GSVIVT01032508001 No alias DNA repair protein UVH3 OS=Arabidopsis thaliana 0.04 SeedPlants
Solyc02g067670.4.1 No alias DNA repair endonuclease (XPG) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006085 XPG_DNA_repair_N 1 96
IPR025527 HUWE1/Rev1_UBM 228 256
IPR006086 XPG-I_dom 866 971
No external refs found!