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Smo71323


Description : Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo71323
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G38290 No alias Peptidyl-tRNA hydrolase family protein 0.03 OrthoFinder output from all 47 species
Adi_g024845 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.02 OrthoFinder output from all 47 species
Ala_g00940 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.03 OrthoFinder output from all 47 species
Cba_g07935 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.02 OrthoFinder output from all 47 species
Ceric.36G064500.1 Ceric.36G064500 not classified & original description: pacid=50568078... 0.03 OrthoFinder output from all 47 species
Gb_12986 No alias component CRS2 of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species
Tin_g14945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 2 174
No external refs found!