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  5. Smo71153

Smo71153 (NGA1)


Aliases : NGA1

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.RAV-type transcription factor


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo71153

Target Alias Description ECC score Gene Family Method Actions
AT1G68840 EDF2, AtRAV2,... related to ABI3/VP1 2 0.02 OrthoFinder output from all 47 species
Ehy_g00006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023582001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_33917 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 OrthoFinder output from all 47 species
MA_3834g0010 EDF2, AtRAV2,... transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
Ore_g44549 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007152_P001 NGA1, Zm00001e007152 transcription factor (RAV/NGATHA) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 133 235
No external refs found!