Smo66769 (WRKY4)

Aliases : WRKY4

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo66769
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.02	OrthoFinder output from all 47 species
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.03	OrthoFinder output from all 47 species
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.02	OrthoFinder output from all 47 species
AT5G07100	WRKY26	WRKY DNA-binding protein 26	0.02	OrthoFinder output from all 47 species
Adi_g058461	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g075760	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g114020	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09415	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21563	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25566	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g29722	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g63033	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene00114.t1	WRKY53,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene06724.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene14711.t1	ATWRKY24,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29744.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15116	WRKY3	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26774	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g30094	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g36931	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g61706	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.28G003100.1	WRKY31,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g00870	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g15958	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g20453	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27869	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g33224	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10883	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19327	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g43650.1	WRKY28,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g53260.1	ATWRKY24,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g62510.1	ATWRKY57,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os03g20550.1	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55080.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os11g02480.2	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g45850.1	WRKY26, LOC_Os11g45850	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g18277	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp3g17660.1	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g38797	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g01131	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g23649	ATWRKY70, WRKY70	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g24026	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g27505	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022734	ATWRKY45, WRKY45	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Solyc02g032950.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc05g007110.2.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g008280.3.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g12510	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g13035	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010048_P001	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e017439_P001	AtWRKY47,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e018322_P001	WRKY4, Zm00001e018322	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e021431_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e031901_P001	WRKY33,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e034487_P001	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	102	158

External Links

No external refs found!

Smo66769 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation