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  5. Smo60006

Smo60006


Description : BEACH domain-containing protein C2 OS=Arabidopsis thaliana


Gene families : OG0005532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo60006

Target Alias Description ECC score Gene Family Method Actions
Adi_g107386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027547001 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_14861 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46892.1 LOC_Os04g46892 BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46894.1 LOC_Os04g46894 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g03525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_16421g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g06934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007294_P001 Zm00001e007294 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR023362 PH-BEACH_dom 1890 1980
No external refs found!