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  5. Smo59936

Smo59936 (ATHB22, MEE68, ZHD2, HB22)


Aliases : ATHB22, MEE68, ZHD2, HB22

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo59936
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00085480 ATHB22, MEE68,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G14687 AtHB32, HB32, ZHD14 homeobox protein 32 0.03 OrthoFinder output from all 47 species
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.02 OrthoFinder output from all 47 species
AT1G74660 MIF1 mini zinc finger 1 0.02 OrthoFinder output from all 47 species
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.02 OrthoFinder output from all 47 species
AT3G28920 HB34, ZHD9, AtHB34 homeobox protein 34 0.02 OrthoFinder output from all 47 species
Adi_g025215 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09361 AtHB24, ZHD6, HB24 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33578 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os08g37400.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os11g13930.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os12g03110.1 MIF2, LOC_Os12g03110 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Zm00001e008082_P001 AtHB31, ZHD4,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Zm00001e009830_P001 HB34, ZHD9,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e018364_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e023331_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Zm00001e034119_P001 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!