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Aliases : ATHB22, MEE68, ZHD2, HB22
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo59934 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00085480 | ATHB22, MEE68,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00038p00027320 | ATHB22, MEE68,... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G69600 | ATHB29, ZFHD1, ZHD11 | zinc finger homeodomain 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G28920 | HB34, ZHD9, AtHB34 | homeobox protein 34 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017963 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080209 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03224 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03921 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05598 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33291 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g57045 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59294.t1 | ATHB22, MEE68,... | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46782 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08186 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000250001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g24810.1 | LOC_Os09g24810 | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07276 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01020 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g35218 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16107 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g116070.1.1 | MIF3, Solyc03g116070 | transcription factor (zf-HD) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008082_P001 | AtHB31, ZHD4,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009830_P001 | HB34, ZHD9,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023331_P001 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034119_P001 | ATHB29, ZFHD1,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0042301 | phosphate ion binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |