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  5. Smo58368

Smo58368


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS6 component


Gene families : OG0003772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo58368

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00220150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT1G64510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 OrthoFinder output from all 47 species
Adi_g019564 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g19098 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g08781 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g30964 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g26011 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.32G022300.1 Ceric.32G022300 component *(uS6c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre12.g520600 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dac_g02644 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g40728 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dde_g06729 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g06910 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g04427 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01019593001 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Gb_07402 No alias component psRPS6 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Gb_07403 No alias component psRPS6 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os03g62630.1 LOC_Os03g62630 component psRPS6 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g38836 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g06876 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10429326g0010 No alias component psRPS6 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Mp4g07210.1 No alias component psRPS6 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Nbi_g25871 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pnu_g10315 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ppi_g06171 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009778 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g19470 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc08g082690.2.1 Solyc08g082690 component psRPS6 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Spa_g37875 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 12 110
No external refs found!