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  5. Smo58350

Smo58350 (STOP1)


Aliases : STOP1

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo58350
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G22890 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01031459001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
Gb_21302 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g36360.1 STOP1, LOC_Os02g36360 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g44830.1 LOC_Os08g44830 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Mp8g12510.1 STOP1 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g12910 STOP1 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 22 43
No external refs found!