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  5. Smo49023

Smo49023


Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL7/L12 component


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo49023
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00131140 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.03 OrthoFinder output from all 47 species
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10540.1 LOC_Os02g10540 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os05g48050.1 LOC_Os05g48050 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os07g43310.1 LOC_Os07g43310 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Solyc02g031970.1.1 Solyc02g031970 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 84 148
No external refs found!