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  5. Smo447032

Smo447032 (UBP12)


Aliases : UBP12

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo447032

Target Alias Description ECC score Gene Family Method Actions
Adi_g107348 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06394 UBP12 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g57720 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29880 UBP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23682.t2 UBP12, Aspi01Gene23682 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010362 UBP12 not classified & original description: CDS=350-7828 0.03 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021281.14 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g18112 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_35991 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13952 UBP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11501 UBP12 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_6934376g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_7843052g0010 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g26173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43540 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04257 MED8 component *(MED8) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740 UBP12 not classified & original description: CDS=294-7754 0.09 OrthoFinder output from all 47 species
Spa_g09112 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13986 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 1516 1875
No external refs found!