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  5. Smo446143

Smo446143


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo446143

Target Alias Description ECC score Gene Family Method Actions
Aev_g17663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01730.t1 Aspi01Gene01730 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21591 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g29087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018217 No alias not classified & original description: CDS=840-4208 0.03 OrthoFinder output from all 47 species
Spa_g55593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 85 213
No external refs found!