Smo444702 (ARR1, RR1)

Aliases : ARR1, RR1

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo444702

Target	Alias	Description	ECC score	Gene Family Method
AT3G46640	LUX, PCL1	Homeodomain-like superfamily protein	0.04	OrthoFinder output from all 47 species
Ala_g07225	ARR1, RR1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g22263	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01816	ARR11	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26069	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001336.2	No alias	Two-component response regulator ARR1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g39028	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15649	ARR11	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g43149	RR14, ARR14	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42997	RR2, ARR2	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03823	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Solyc06g076350.3.1	Solyc06g076350	component LUX of circadian clock Evening complex (EC)	0.03	OrthoFinder output from all 47 species
Spa_g29793	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	187	237

External Links

No external refs found!

Smo444702 (ARR1, RR1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation