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  5. Smo444139

Smo444139


Description : Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR regulation.LIR1 protein


Gene families : OG0007865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo444139
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g01340.1 CCL, LOC_Os01g01340 LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.08 OrthoFinder output from all 47 species
Lfl_g06887 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Ore_g04797 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Ore_g32365 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Pir_g00779 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Pnu_g17541 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Sam_g26362 No alias regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Spa_g03469 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009856 Lir1 20 122
No external refs found!