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  5. Smo444050

Smo444050 (ATINO80, INO80)


Aliases : ATINO80, INO80

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor


Gene families : OG0003922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo444050
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00190690 ATINO80, INO80,... Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ala_g22698 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.05 OrthoFinder output from all 47 species
Als_g16557 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.02 OrthoFinder output from all 47 species
Als_g16558 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.04 OrthoFinder output from all 47 species
Aob_g12486 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Aop_g19078 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.08 OrthoFinder output from all 47 species
Ceric.02G047900.1 ATINO80, INO80,... ATPase component *(Ino80) of chromatin remodelling... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021501.9 ATINO80, INO80 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dcu_g11743 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.11 OrthoFinder output from all 47 species
Dde_g25805 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Ehy_g12559 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
GSVIVT01033231001 ATINO80, INO80 Chromatin organisation.chromatin remodeling... 0.13 OrthoFinder output from all 47 species
Gb_04007 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.06 OrthoFinder output from all 47 species
LOC_Os03g22900.1 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.07 OrthoFinder output from all 47 species
MA_3312g0010 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.06 OrthoFinder output from all 47 species
Mp8g00130.1 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.09 OrthoFinder output from all 47 species
Ore_g02728 ATINO80, INO80 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16643 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.02 OrthoFinder output from all 47 species
Pir_g13631 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Ppi_g08475 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023246 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.07 OrthoFinder output from all 47 species
Sam_g11608 No alias ATPase component *(Ino80) of chromatin remodelling... 0.06 OrthoFinder output from all 47 species
Solyc04g016370.3.1 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.09 OrthoFinder output from all 47 species
Zm00001e001678_P001 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.11 OrthoFinder output from all 47 species
Zm00001e038194_P002 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR020838 DBINO 317 446
No external refs found!