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  5. Smo442701

Smo442701


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit


Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442701
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT4G08520 No alias SNARE-like superfamily protein 0.05 OrthoFinder output from all 47 species
Als_g02767 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aop_g01931 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ceric.25G075600.1 Ceric.25G075600 subunit zeta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.67 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Cre08.g371450 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g14889 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21225 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Gb_26280 No alias subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os05g38610.1 LOC_Os05g38610 subunit zeta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Lfl_g30792 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Mp1g05960.1 No alias subunit zeta of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Nbi_g19235 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Pp3c4_17280V3.1 Pp3c4_17280 SNARE-like superfamily protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002385 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Solyc02g071170.3.1 Solyc02g071170 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Solyc12g044910.2.1 Solyc12g044910 subunit zeta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Spa_g14691 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Spa_g14692 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Spa_g51092 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Tin_g06378 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 9 150
No external refs found!