LOC_Os03g08050.1

Description : aminoacyl-tRNA binding factor (eEF1A)

Gene families : OG_01_0000191 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000191_tree ,
OG_02_0000317 (LandPlants) Phylogenetic Tree(s): OG_02_0000317_tree ,
OG_03_0000423 (SeedPlants) Phylogenetic Tree(s): OG_03_0000423_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g08050.1
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00216110	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.03	Archaeplastida
AMTR_s00066p00072310	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.06	Archaeplastida
AT1G07920	No alias	GTP binding Elongation factor Tu family protein	0.05	Archaeplastida
AT1G07930	No alias	GTP binding Elongation factor Tu family protein	0.03	Archaeplastida
AT1G07940	No alias	GTP binding Elongation factor Tu family protein	0.04	Archaeplastida
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.2	Archaeplastida
Cpa\|evm.model.tig00021352.57	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.06	Archaeplastida
Cre06.g284750	No alias	Protein biosynthesis.translation termination.eRF3...	0.08	Archaeplastida
Cre12.g498600	No alias	Elongation factor 1-alpha OS=Glycine max	0.01	Archaeplastida
GSVIVT01025638001	No alias	Elongation factor 1-alpha OS=Zea mays	0.04	Archaeplastida
Gb_17471	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
Gb_22919	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.03	Archaeplastida
MA_651220g0010	No alias	Elongation factor 1-alpha OS=Oryza sativa subsp....	0.04	Archaeplastida
MA_7085077g0010	No alias	no hits & (original description: none)	0.09	Archaeplastida
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.3	Archaeplastida
Pp3c1_23850V3.1	No alias	GTP binding Elongation factor Tu family protein	0.06	Archaeplastida
Pp3c1_23920V3.1	No alias	GTP binding Elongation factor Tu family protein	0.13	Archaeplastida
Pp3c27_2160V3.1	No alias	Translation elongation factor EF1A/initiation factor...	0.02	Archaeplastida
Pp3c2_6650V3.1	No alias	GTP binding Elongation factor Tu family protein	0.04	Archaeplastida
Pp3c2_6770V3.1	No alias	GTP binding Elongation factor Tu family protein	0.04	Archaeplastida
Smo115313	No alias	Protein biosynthesis.translation termination.eRF3...	0.02	Archaeplastida
Smo169717	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.04	Archaeplastida
Smo171512	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.06	Archaeplastida
Smo270693	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.05	Archaeplastida
Solyc06g005060.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.1	Archaeplastida
Solyc06g009970.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.03	Archaeplastida
Solyc06g069020.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc11g069097.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	Archaeplastida
Solyc11g150146.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
Zm00001e026762_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.13	Archaeplastida
Zm00001e026763_P003	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.11	Archaeplastida
Zm00001e030598_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
Zm00001e031389_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e031390_P004	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.12	Archaeplastida
Zm00001e031391_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	Archaeplastida
Zm00001e031407_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.08	Archaeplastida
Zm00001e037355_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	Archaeplastida
Zm00001e040640_P002	No alias	eRF3 peptide release factor	0.02	Archaeplastida
AMTR_s00059p00216110	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.03	LandPlants
AMTR_s00066p00072310	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.06	LandPlants
AT1G07920	No alias	GTP binding Elongation factor Tu family protein	0.05	LandPlants
AT1G07930	No alias	GTP binding Elongation factor Tu family protein	0.03	LandPlants
AT1G07940	No alias	GTP binding Elongation factor Tu family protein	0.04	LandPlants
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.2	LandPlants
GSVIVT01025638001	No alias	Elongation factor 1-alpha OS=Zea mays	0.03	LandPlants
Gb_17471	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	LandPlants
Gb_22919	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	LandPlants
MA_651220g0010	No alias	Elongation factor 1-alpha OS=Oryza sativa subsp....	0.03	LandPlants
MA_7085077g0010	No alias	no hits & (original description: none)	0.08	LandPlants
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.3	LandPlants
Pp3c1_23850V3.1	No alias	GTP binding Elongation factor Tu family protein	0.05	LandPlants
Pp3c1_23920V3.1	No alias	GTP binding Elongation factor Tu family protein	0.13	LandPlants
Pp3c2_6650V3.1	No alias	GTP binding Elongation factor Tu family protein	0.03	LandPlants
Pp3c2_6770V3.1	No alias	GTP binding Elongation factor Tu family protein	0.04	LandPlants
Smo169717	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.03	LandPlants
Smo171512	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.06	LandPlants
Smo270693	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.05	LandPlants
Solyc06g005060.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	LandPlants
Solyc06g009970.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.03	LandPlants
Solyc11g069097.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	LandPlants
Solyc11g150146.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	LandPlants
Zm00001e026762_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.12	LandPlants
Zm00001e026763_P003	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.1	LandPlants
Zm00001e030598_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	LandPlants
Zm00001e031389_P001	No alias	no hits & (original description: none)	0.05	LandPlants
Zm00001e031390_P004	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.11	LandPlants
Zm00001e031391_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	LandPlants
Zm00001e031407_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.07	LandPlants
Zm00001e037355_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	LandPlants
AMTR_s00012p00237190	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.02	SeedPlants
AMTR_s00059p00216110	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.04	SeedPlants
AMTR_s00066p00072310	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.06	SeedPlants
AT1G07920	No alias	GTP binding Elongation factor Tu family protein	0.05	SeedPlants
AT1G07930	No alias	GTP binding Elongation factor Tu family protein	0.03	SeedPlants
AT1G07940	No alias	GTP binding Elongation factor Tu family protein	0.04	SeedPlants
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.2	SeedPlants
GSVIVT01025638001	No alias	Elongation factor 1-alpha OS=Zea mays	0.03	SeedPlants
Gb_17471	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	SeedPlants
Gb_22919	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	SeedPlants
MA_651220g0010	No alias	Elongation factor 1-alpha OS=Oryza sativa subsp....	0.03	SeedPlants
MA_7085077g0010	No alias	no hits & (original description: none)	0.08	SeedPlants
Solyc06g005060.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	SeedPlants
Solyc06g009970.3.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.03	SeedPlants
Solyc11g069097.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	SeedPlants
Solyc11g150146.1.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	SeedPlants
Zm00001e026762_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.12	SeedPlants
Zm00001e026763_P003	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.1	SeedPlants
Zm00001e030598_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	SeedPlants
Zm00001e031389_P001	No alias	no hits & (original description: none)	0.05	SeedPlants
Zm00001e031390_P004	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.11	SeedPlants
Zm00001e031391_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	SeedPlants
Zm00001e031407_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.07	SeedPlants
Zm00001e037355_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	322	429
IPR000795	T_Tr_GTP-bd_dom	5	222
IPR004161	EFTu-like_2	248	313

External Links

No external refs found!

LOC_Os03g08050.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation