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  5. Smo441144

Smo441144


Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo441144

Target Alias Description ECC score Gene Family Method Actions
AT5G22760 No alias PHD finger family protein 0.04 OrthoFinder output from all 47 species
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.03 OrthoFinder output from all 47 species
Adi_g023154 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36310.t1 Aspi01Gene36310 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27439 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cre05.g247000 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g08699 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17420 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05757 No alias PHD finger transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11538 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g03480.1 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g38137 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25995 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035778_P001 Zm00001e035778 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028942 WHIM1_dom 373 405
No external refs found!