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  5. Smo440964

Smo440964 (SDH1-1)


Aliases : SDH1-1

Description : Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH1-type flavoprotein component


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo440964
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Adi_g079524 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Ala_g10272 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Dde_g08253 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01018976001 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.03 OrthoFinder output from all 47 species
LOC_Os07g04240.1 SDH1-1, LOC_Os07g04240 flavoprotein component SDH1 of succinate dehydrogenase complex 0.04 OrthoFinder output from all 47 species
Solyc02g085350.4.1 SDH1-1, Solyc02g085350 flavoprotein component SDH1 of succinate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
Tin_g16793 SDH1-1 EC_1.3 oxidoreductase acTing on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 496 628
No external refs found!