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  5. Smo440407

Smo440407


Description : Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana


Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo440407
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Ala_g02268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23056 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Gb_21909 No alias Protein transport protein Sec24-like At3g07100... 0.04 OrthoFinder output from all 47 species
Lfl_g34066 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g04931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g068500.2.1 Solyc11g068500 Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 117 369
No external refs found!