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  5. Smo440070

Smo440070


Description : Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo440070

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.02 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g087890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31651.t1 Aspi01Gene31651 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63284.t1 Aspi01Gene63284 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G099900.1 Ceric.04G099900 not classified & original description: pacid=50631667... 0.04 OrthoFinder output from all 47 species
Ceric.14G012300.1 Ceric.14G012300 not classified & original description: pacid=50634093... 0.04 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06797 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31324 No alias Probable clathrin assembly protein At4g32285... 0.07 OrthoFinder output from all 47 species
LOC_Os01g50010.1 LOC_Os01g50010 ECA1/2 clathrin coated vesicle adaptor protein 0.06 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g35160.1 LOC_Os05g35160 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48630.1 LOC_Os06g48630 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Len_g10703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_89795g0010 No alias Putative clathrin assembly protein At1g14910... 0.02 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.04 OrthoFinder output from all 47 species
Nbi_g13944 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022248 No alias not classified & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g049380.1.1 Solyc07g049380 clathrin assembly protein (AP180) 0.03 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.03 OrthoFinder output from all 47 species
Zm00001e031059_P001 Zm00001e031059 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 35 337
No external refs found!