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  5. Smo439710

Smo439710


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439710
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00179170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
AT2G37600 No alias Ribosomal protein L36e family protein 0.16 OrthoFinder output from all 47 species
AT3G53740 No alias Ribosomal protein L36e family protein 0.2 OrthoFinder output from all 47 species
AT5G02450 No alias Ribosomal protein L36e family protein 0.2 OrthoFinder output from all 47 species
Adi_g022992 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g035376 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g067485 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Als_g37408 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g41135 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g16043 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Aop_g17172 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g32159 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34579.t1 Aspi01Gene34579 component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030800 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Azfi_s0383.g067431 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Cba_g03577 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g23777 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g76479 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.04G069000.1 Ceric.04G069000 component *(eL36) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.08G064600.1 Ceric.08G064600 component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
Dac_g01113 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Dac_g25734 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g17175 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Dde_g37416 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g04197 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01026914001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
GSVIVT01028917001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
Gb_10248 No alias component RPL36 of LSU proteome component 0.11 OrthoFinder output from all 47 species
Gb_27261 No alias component RPL36 of LSU proteome component 0.11 OrthoFinder output from all 47 species
LOC_Os01g62350.1 LOC_Os01g62350 component RPL36 of LSU proteome component 0.12 OrthoFinder output from all 47 species
LOC_Os05g38520.1 LOC_Os05g38520 component RPL36 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Lfl_g31817 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g38888 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10430792g0010 No alias component RPL36 of LSU proteome component 0.12 OrthoFinder output from all 47 species
MA_24782g0010 No alias component RPL36 of LSU proteome component 0.06 OrthoFinder output from all 47 species
MA_69756g0010 No alias component RPL36 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.11 OrthoFinder output from all 47 species
Msp_g00137 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g44089 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Pir_g05044 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g07917 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g56562 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_19960V3.1 Pp3c14_19960 Ribosomal protein L36e family protein 0.13 OrthoFinder output from all 47 species
Pp3c1_32310V3.1 Pp3c1_32310 Ribosomal protein L36e family protein 0.08 OrthoFinder output from all 47 species
Ppi_g25844 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Ppi_g33926 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g34019 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g38235 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004334 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07231 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.16 OrthoFinder output from all 47 species
Sam_g23187 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g23349 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g23546 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31192 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Sam_g39854 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41738 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g45996 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g46575 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g48200 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g48487 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Solyc03g025520.4.1 Solyc03g025520 component RPL36 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc06g036050.4.1 Solyc06g036050 component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g03176 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g03177 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g42185 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g44897 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g41281 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e027238_P001 Zm00001e027238 component RPL36 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Zm00001e031832_P002 Zm00001e031832 component RPL36 of LSU proteome component 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 8 101
No external refs found!