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No description available
Gene families : OG0001249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001249_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo439529 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00149p00102010 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT5G16680 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g02613 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11357 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g26817 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01217 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g12429 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g41453 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24234.t1 | Aspi01Gene24234 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0080.g038469 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G080200.1 | Ceric.09G080200 | regulatory component *(AIPP2) of chromatin silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14673 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08331 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17316 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g02970 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08700 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024330001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40677 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g42196.1 | LOC_Os10g42196 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g18770.1 | LOC_Os11g18770 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g24540.1 | LOC_Os12g24540 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g35705 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g17806 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| MA_106351g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g14570.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15478 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25774 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41526 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19125 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g36098 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g070990.4.1 | Solyc04g070990 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49012 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49748 | No alias | regulatory component *(AIPP2) of chromatin silencing... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e002445_P001 | Zm00001e002445 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e029823_P001 | Zm00001e029823 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e037801_P001 | Zm00001e037801 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:1990380 | K48-linked deubiquitinase activity | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |