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  5. Smo439243

Smo439243


Description : Cell wall.pectin.modification and degradation.pectate lyase


Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439243

Target Alias Description ECC score Gene Family Method Actions
AT1G30350 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g013762 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10720 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0123.g048430 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=163-1392 0.03 OrthoFinder output from all 47 species
Ceric.14G053100.1 Ceric.14G053100 EC_4.2 carbon-oxygen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.30G051100.1 RHS14, Ceric.30G051100 EC_4.2 carbon-oxygen lyase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G051200.1 RHS14, Ceric.30G051200 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G020600.1 Ceric.34G020600 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g29530 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31050 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_103716g0010 No alias pectate lyase 0.02 OrthoFinder output from all 47 species
MA_10430145g0030 No alias pectate lyase 0.02 OrthoFinder output from all 47 species
MA_66914g0010 No alias pectate lyase 0.05 OrthoFinder output from all 47 species
Mp8g00770.1 No alias pectate lyase 0.02 OrthoFinder output from all 47 species
Mp8g10190.1 No alias pectate lyase 0.04 OrthoFinder output from all 47 species
Ppi_g06396 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22126 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g014000.4.1 Solyc05g014000 pectate lyase 0.03 OrthoFinder output from all 47 species
Solyc06g083580.4.1 Solyc06g083580 pectate lyase 0.03 OrthoFinder output from all 47 species
Spa_g40115 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 232 353
No external refs found!