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  5. Smo439220

Smo439220 (CTS, ACN2, PED3, AtABCD1, PXA1)


Aliases : CTS, ACN2, PED3, AtABCD1, PXA1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter


Gene families : OG0003180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439220

Target Alias Description ECC score Gene Family Method Actions
AT4G39850 CTS, ACN2, PED3,... peroxisomal ABC transporter 1 0.02 OrthoFinder output from all 47 species
Aspi01Gene50290.t2 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030599 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: CDS=293-4504 0.03 OrthoFinder output from all 47 species
Ceric.01G050100.1 CTS, ACN2, PED3,... subfamily ABCD transporter & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g02451 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_526197g0010 CTS, ACN2, PED3,... ABC transporter D family member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g05350 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022570 CTS, ACN2, PED3,... subfamily ABCD transporter & original description: CDS=217-4257 0.02 OrthoFinder output from all 47 species
Sam_g36184 No alias subfamily ABCD transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g055120.3.1 CTS, ACN2, PED3,... peroxisomal fatty acid transporter (PXA1). subfamily... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 95 357
No external refs found!