LOC_Os03g07234.1

Description : Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana (sp|q9lxf2|pp385_arath : 534.0)

Gene families : OG_01_0012988 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012988_tree ,
OG_02_0012953 (LandPlants) Phylogenetic Tree(s): OG_02_0012953_tree ,
OG_03_0013008 (SeedPlants) Phylogenetic Tree(s): OG_03_0013008_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g07234.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AT5G15300	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.06	Archaeplastida
GSVIVT01011444001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.06	Archaeplastida
Zm00001e038919_P001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.17	Archaeplastida
AT5G15300	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.11	LandPlants
GSVIVT01011444001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.05	LandPlants
Zm00001e038919_P001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.12	LandPlants
AT5G15300	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.1	SeedPlants
Zm00001e038919_P001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.11	SeedPlants

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	209	256
IPR002885	Pentatricopeptide_repeat	311	358
IPR002885	Pentatricopeptide_repeat	149	174
IPR002885	Pentatricopeptide_repeat	44	73
IPR002885	Pentatricopeptide_repeat	380	411

External Links

No external refs found!