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  5. LOC_Os03g07080.1

LOC_Os03g07080.1


Description : deadenylase component CCR4 of CCR4-NOT complex


Gene families : OG_01_0003309 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003309_tree ,
OG_02_0004039 (LandPlants) Phylogenetic Tree(s): OG_02_0004039_tree ,
OG_03_0006519 (SeedPlants) Phylogenetic Tree(s): OG_03_0006519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07080.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT3G58560 No alias DNAse I-like superfamily protein 0.03 Archaeplastida
AT3G58580 No alias DNAse I-like superfamily protein 0.06 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.05 Archaeplastida
Pp3c24_20740V3.1 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Smo270348 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
AT3G58560 No alias DNAse I-like superfamily protein 0.03 LandPlants
AT3G58580 No alias DNAse I-like superfamily protein 0.05 LandPlants
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 LandPlants
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 LandPlants
Mp1g17770.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.05 LandPlants
Pp3c23_22040V3.1 No alias DNAse I-like superfamily protein 0.01 LandPlants
Pp3c24_20740V3.1 No alias DNAse I-like superfamily protein 0.02 LandPlants
Smo270348 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 LandPlants
AT3G58560 No alias DNAse I-like superfamily protein 0.03 SeedPlants
AT3G58580 No alias DNAse I-like superfamily protein 0.05 SeedPlants
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 SeedPlants
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 SeedPlants
Solyc10g078950.2.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR031615 Zfn-C6H2 72 110
IPR005135 Endo/exonuclease/phosphatase 259 592
No external refs found!