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  5. Smo437282

Smo437282


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP0 component


Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo437282
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT3G09200 No alias Ribosomal protein L10 family protein 0.03 OrthoFinder output from all 47 species
Als_g50367 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g13520 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020356 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.18G048600.1 Ceric.18G048600 component *(uL10) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dac_g01446 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os08g03640.1 LOC_Os08g03640 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os12g03880.1 LOC_Os12g03880 component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Len_g16154 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Ore_g06033 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g10636 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_8280V3.1 Pp3c1_8280 Ribosomal protein L10 family protein 0.02 OrthoFinder output from all 47 species
Sam_g09753 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g09883 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc05g054580.3.1 Solyc05g054580 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g56101 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g14132 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!