LOC_Os03g06440.2


Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana (sp|q8gyd9|sde3_arath : 1035.0)


Gene families : OG_01_0002518 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002518_tree ,
OG_02_0003674 (LandPlants) Phylogenetic Tree(s): OG_02_0003674_tree ,
OG_03_0003078 (SeedPlants) Phylogenetic Tree(s): OG_03_0003078_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06440.2
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272090 evm_27.TU.AmTr_v1... Probable RNA helicase SDE3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018011001 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_16361 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434025g0010 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g00070.1 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_8920V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo430895 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc06g054020.3.1 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e000456_P001 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
AMTR_s00002p00272090 evm_27.TU.AmTr_v1... Probable RNA helicase SDE3 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01018011001 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_16361 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 LandPlants
Mp5g00070.1 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.01 LandPlants
Solyc06g054020.3.1 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.05 LandPlants
Zm00001e000456_P001 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc06g054020.3.1 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.05 SeedPlants
Zm00001e000456_P001 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 591 794
IPR041677 DNA2/NAM7_AAA_11 510 579
IPR041677 DNA2/NAM7_AAA_11 395 469
No external refs found!