Smo429547

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor

Gene families : OG0003006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo429547

Target	Alias	Description	ECC score	Gene Family Method
Aev_g34337	No alias	chromatin remodeling factor *(Ris1) & original description: none	0.02	OrthoFinder output from all 47 species
Cre01.g046237	No alias	Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
GSVIVT01034370001	No alias	Chromatin organisation.chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Gb_33076	No alias	chromatin remodeling factor (Ris1)	0.03	OrthoFinder output from all 47 species
Mp8g05230.1	No alias	chromatin remodeling factor (Ris1)	0.02	OrthoFinder output from all 47 species
Solyc02g050280.4.1	Solyc02g050280	chromatin remodeling factor (Ris1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027370	Znf-RING_euk	684	721

External Links

No external refs found!