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  5. Smo425588

Smo425588


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo425588

Target Alias Description ECC score Gene Family Method Actions
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.03 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.07 OrthoFinder output from all 47 species
AT5G52280 No alias Myosin heavy chain-related protein 0.03 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09919.t1 Aspi01Gene09919 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20829.t1 Aspi01Gene20829 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012083 No alias not classified & original description: CDS=678-3254 0.03 OrthoFinder output from all 47 species
Cba_g05334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os10g39950.1 LOC_Os10g39950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.02 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 12 142
No external refs found!