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  5. Smo422020

Smo422020


No description available


Gene families : OG0005810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo422020

Target Alias Description ECC score Gene Family Method Actions
AT5G38720 No alias unknown protein; Has 13419 Blast hits to 9093 proteins... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.18 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g49620.1 LOC_Os02g49620 pre-40S ribosomal subunit assembly factor (RRP7) 0.06 OrthoFinder output from all 47 species
Solyc02g089600.3.1 Solyc02g089600 pre-40S ribosomal subunit assembly factor (RRP7) 0.04 OrthoFinder output from all 47 species
Solyc03g046350.3.1 Solyc03g046350 pre-40S ribosomal subunit assembly factor (RRP7) 0.07 OrthoFinder output from all 47 species
Zm00001e015713_P002 Zm00001e015713 pre-40S ribosomal subunit assembly factor (RRP7) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024326 RRP7_C 272 364
No external refs found!