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  5. Smo421434

Smo421434


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo421434

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G64590 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G23430 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G02540 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g16585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52075.t1 Aspi01Gene52075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56854.t1 Aspi01Gene56854 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63398.t1 Aspi01Gene63398 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.05 OrthoFinder output from all 47 species
Dcu_g22250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g25457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
GSVIVT01028904001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01028905001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
LOC_Os04g22380.1 LOC_Os04g22380 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
LOC_Os06g03830.1 LOC_Os06g03830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40020.3 LOC_Os10g40020 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
LOC_Os11g07930.1 LOC_Os11g07930 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Len_g13416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_61875g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_78644g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Mp4g15420.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Nbi_g12126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Ore_g40980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420931 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g01710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 36 177
No external refs found!