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  5. Smo420594

Smo420594 (ATALY3, ALY3)


Aliases : ATALY3, ALY3

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0002386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo420594
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT3G05380 ATALY2, ALY2 DIRP ;Myb-like DNA-binding domain 0.03 OrthoFinder output from all 47 species
AT3G21430 ATALY3, ALY3 No description available 0.08 OrthoFinder output from all 47 species
Adi_g019378 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Aev_g48648 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Aob_g13685 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G005600.1 ATALY3, ALY3,... MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Cre13.g570150 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dcu_g07164 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01000089001 ATALY2, ALY2 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01017770001 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
LOC_Os03g43800.1 ATALY3, ALY3,... transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Lfl_g02449 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
MA_10427106g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_162771g0010 ATALY3, ALY3 Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_170387g0010 ATALY3, ALY3 Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g06450.1 ATALY3, ALY3 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Ore_g06573 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026439 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g067560.3.1 ATALY3, ALY3,... transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc12g098160.2.1 ATALY3, ALY3,... transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e041708_P001 ATALY3, ALY3,... transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033471 DIRP 372 473
No external refs found!