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  5. AMTR_s00066p00157030

AMTR_s00066p00157030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.162

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00157030
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00236050 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00038p00175390 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00066p00157220 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.01 Archaeplastida
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26213 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_31439 No alias transcription factor (mTERF) 0.01 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_415377g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.01 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.01 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.02 LandPlants
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
GSVIVT01028383001 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Gb_15878 No alias transcription factor (mTERF) 0.05 LandPlants
Gb_26176 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.04 LandPlants
Gb_31439 No alias transcription factor (mTERF) 0.01 LandPlants
MA_415377g0010 No alias no hits & (original description: none) 0.01 LandPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.01 LandPlants
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.04 LandPlants
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.02 SeedPlants
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 SeedPlants
GSVIVT01028383001 No alias RNA biosynthesis.organelle... 0.02 SeedPlants
Gb_12989 No alias transcription factor (mTERF) 0.01 SeedPlants
Gb_26175 No alias transcription factor (mTERF) 0.01 SeedPlants
Gb_26176 No alias transcription factor (mTERF) 0.02 SeedPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_415377g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_929479g0010 No alias transcription factor (mTERF) 0.01 SeedPlants
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 98 194
IPR003690 MTERF 174 367
No external refs found!