Smo418944

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.small subunit

Gene families : OG0006193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006193_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo418944

Target	Alias	Description	ECC score	Gene Family Method
Adi_g025475	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.03	OrthoFinder output from all 47 species
Adi_g025476	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.04	OrthoFinder output from all 47 species
Adi_g080163	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.02	OrthoFinder output from all 47 species
Aop_g00760	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.02	OrthoFinder output from all 47 species
Aspi01Gene24613.t1	Aspi01Gene24613	small subunit *(NRPC15) of TFIIIf transcription factor...	0.01	OrthoFinder output from all 47 species
Azfi_s0367.g067001	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.08	OrthoFinder output from all 47 species
Cba_g18928	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.02	OrthoFinder output from all 47 species
Dac_g10668	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.01	OrthoFinder output from all 47 species
Dcu_g03047	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.02	OrthoFinder output from all 47 species
Dde_g25801	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.03	OrthoFinder output from all 47 species
Ehy_g02889	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.02	OrthoFinder output from all 47 species
LOC_Os08g16780.1	LOC_Os08g16780	small subunit of TFIIIf transcription factor complex	0.01	OrthoFinder output from all 47 species
MA_179020g0010	No alias	small subunit of TFIIIf transcription factor complex	0.03	OrthoFinder output from all 47 species
Sam_g07993	No alias	small subunit *(NRPC15) of TFIIIf transcription factor...	0.01	OrthoFinder output from all 47 species
Zm00001e029832_P001	Zm00001e029832	small subunit of TFIIIf transcription factor complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006886	RNA_pol_III_Rpc5	23	428

External Links

No external refs found!

Smo418944

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation