LOC_Os03g02690.1

Description : assembly factor CRR1 involved in NDH complex assembly

Gene families : OG_01_0008267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008267_tree ,
OG_02_0008322 (LandPlants) Phylogenetic Tree(s): OG_02_0008322_tree ,
OG_03_0010915 (SeedPlants) Phylogenetic Tree(s): OG_03_0010915_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g02690.1
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00125390	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	Archaeplastida
AT5G52100	crr1	Dihydrodipicolinate reductase, bacterial/plant	0.04	Archaeplastida
GSVIVT01010618001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.06	Archaeplastida
Gb_11120	No alias	assembly factor CRR1 involved in NDH complex assembly	0.07	Archaeplastida
Smo75294	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	Archaeplastida
Solyc03g026210.4.1	No alias	assembly factor CRR1 involved in NDH complex assembly	0.05	Archaeplastida
Zm00001e000118_P004	No alias	No annotation	0.21	Archaeplastida
AMTR_s00069p00125390	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.02	LandPlants
AT5G52100	crr1	Dihydrodipicolinate reductase, bacterial/plant	0.03	LandPlants
GSVIVT01010618001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.05	LandPlants
Gb_11120	No alias	assembly factor CRR1 involved in NDH complex assembly	0.06	LandPlants
Smo75294	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	LandPlants
Solyc03g026210.4.1	No alias	assembly factor CRR1 involved in NDH complex assembly	0.05	LandPlants
Zm00001e000118_P004	No alias	No annotation	0.21	LandPlants
AMTR_s00069p00125390	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.02	SeedPlants
AT5G52100	crr1	Dihydrodipicolinate reductase, bacterial/plant	0.03	SeedPlants
GSVIVT01010618001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.06	SeedPlants
Gb_11120	No alias	assembly factor CRR1 involved in NDH complex assembly	0.06	SeedPlants
Solyc03g026210.4.1	No alias	assembly factor CRR1 involved in NDH complex assembly	0.05	SeedPlants
Zm00001e000118_P004	No alias	No annotation	0.22	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006553	lysine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009085	lysine biosynthetic process	None	Extended
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046451	diaminopimelate metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000846	DapB_N	37	197
IPR022663	DapB_C	205	335

External Links

No external refs found!

LOC_Os03g02690.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation