LOC_Os03g02540.1


Description : component CSN1 of COP9 signalosome complex


Gene families : OG_01_0004721 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004721_tree ,
OG_02_0005989 (LandPlants) Phylogenetic Tree(s): OG_02_0005989_tree ,
OG_03_0007495 (SeedPlants) Phylogenetic Tree(s): OG_03_0007495_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g02540.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AT3G61140 ATSK31, ATFUS6,... 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 Archaeplastida
Cpa|evm.model.tig00021608.5 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 Archaeplastida
Cre05.g234300 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.06 Archaeplastida
GSVIVT01027510001 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 Archaeplastida
Solyc01g091650.3.1 No alias component CSN1 of COP9 signalosome complex 0.03 Archaeplastida
Zm00001e000114_P001 No alias component CSN1 of COP9 signalosome complex 0.06 Archaeplastida
AT3G61140 ATSK31, ATFUS6,... 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 LandPlants
GSVIVT01027510001 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 LandPlants
Pp3c11_20980V3.1 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.01 LandPlants
Solyc01g091650.3.1 No alias component CSN1 of COP9 signalosome complex 0.03 LandPlants
Zm00001e000114_P001 No alias component CSN1 of COP9 signalosome complex 0.06 LandPlants
AMTR_s00069p00104060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 SeedPlants
AT3G61140 ATSK31, ATFUS6,... 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 SeedPlants
GSVIVT01027510001 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 SeedPlants
Solyc01g091650.3.1 No alias component CSN1 of COP9 signalosome complex 0.03 SeedPlants
Zm00001e000114_P001 No alias component CSN1 of COP9 signalosome complex 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 103 277
IPR000717 PCI_dom 293 394
No external refs found!