LOC_Os10g01570 (Os10g0104900)


Aliases : Os10g0104900

Description : 27.3.46 RNA.regulation of transcription.DNA methyltransferases Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3 (CMT3)


Gene families : OG_01_0001977 (Gene family) Phylogenetic Tree(s): OG0001977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g01570
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G69770 CMT3 chromomethylase 3 0.11 Gene family
GSVIVT01025386001 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.14 Gene family
GSVIVT01033464001 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.16 Gene family
MA_173651g0010 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.14 Gene family
Solyc01g006100.3.1 Solyc01g006100.3 27.3.46 RNA.regulation of transcription.DNA... 0.13 Gene family
Solyc12g100330.2.1 Solyc12g100330.2 27.3.46 RNA.regulation of transcription.DNA... 0.04 Gene family
Zm00001d002330 GRMZM2G005310 27.3.46 RNA.regulation of transcription.DNA... 0.13 Gene family
Zm00001d026291 GRMZM2G025592 27.3.46 RNA.regulation of transcription.DNA... 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 4 324
No external refs found!