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  5. Smo416246

Smo416246 (DFL2, GH3-10)


Aliases : DFL2, GH3-10

Description : Jasmonic acid-amido synthetase JAR1 OS=Oryza sativa subsp. japonica


Gene families : OG0000489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo416246
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT2G46370 JAR1, FIN219 Auxin-responsive GH3 family protein 0.02 OrthoFinder output from all 47 species
Ala_g07609 JAR1, FIN219 jasmonoyl-amino acid synthetase *(JAR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g49533 DFL2, GH3-10 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.06G031600.1 JAR1, FIN219,... jasmonoyl-amino acid synthetase *(JAR1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G077300.1 JAR1, FIN219,... not classified & original description: pacid=50598317... 0.02 OrthoFinder output from all 47 species
Dac_g35793 DFL2, GH3-10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g08340.1 JAR1, FIN219,... Probable indole-3-acetic acid-amido synthetase GH3.12... 0.02 OrthoFinder output from all 47 species
Nbi_g29447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28118 DFL2, GH3-10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41586 JAR1, FIN219 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 7 533
No external refs found!