Smo413798


No description available


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo413798
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00211650 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
Adi_g126576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46069.t1 Aspi01Gene46069 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.05 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01006298001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g44020.2 LOC_Os08g44020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g19716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434775g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13580.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g03160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g20220.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g11130.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc05g051350.2.1 Solyc05g051350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g011280.3.1 Solyc11g011280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011290.3.1 Solyc11g011290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g011300.2.1 Solyc11g011300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g088050.2.1 Solyc12g088050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04774 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 387 455
No external refs found!