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  5. Smo413471

Smo413471


No description available


Gene families : OG0003459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo413471
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT1G04140 No alias Transducin family protein / WD-40 repeat family protein 0.07 OrthoFinder output from all 47 species
AT5G43930 No alias Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
Adi_g114851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G076900.1 Ceric.25G076900 not classified & original description: pacid=50594585... 0.06 OrthoFinder output from all 47 species
Dcu_g47211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001859001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028455001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_28988 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g18820.2 LOC_Os02g18820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03437 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10428045g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017365 No alias not classified & original description: CDS=380-3100 0.04 OrthoFinder output from all 47 species
Sam_g27650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053130.3.1 Solyc05g053130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g12788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008565_P001 Zm00001e008565 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040649_P001 Zm00001e040649 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 142 181
No external refs found!