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No description available
Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo413341 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G05570 | No alias | transducin family protein / WD-40 repeat family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g083853 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g07812 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05823 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04947 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_7753240g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g09160.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15434 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29227 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06999 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g05717 | No alias | regulatory protein *(TMS) of vesicle trafficking &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |