Smo411220

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo411220
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00092310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Aev_g08871	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g57519	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29167	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0075.g037686	No alias	subfamily ABCG transporter & original description: CDS=355-3330	0.03	OrthoFinder output from all 47 species
Azfi_s0272.g061270	No alias	subfamily ABCG transporter & original description: CDS=338-3691	0.04	OrthoFinder output from all 47 species
Ceric.02G069600.1	Ceric.02G069600	subfamily ABCG transporter & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.1Z169300.1	Ceric.1Z169300	not classified & original description: pacid=50567837...	0.02	OrthoFinder output from all 47 species
Ore_g19705	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63521	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g075020.3.1	Solyc06g075020	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Tin_g02193	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008651_P001	Zm00001e008651	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	477	630

External Links

No external refs found!

Smo411220

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation