LOC_Os09g38420 (Os09g0556500)


Aliases : Os09g0556500

Description : 29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH


Gene families : OG_01_0002008 (Gene family) Phylogenetic Tree(s): OG0002008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g38420
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT2G31170 SYCO ARATH Cysteinyl-tRNA synthetase, class Ia family protein 0.15 Gene family
Cpa|evm.model.tig00020703.23 No alias 29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH 0.04 Gene family
Cre01.g069472 No alias 29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH 0.06 Gene family
GSVIVT01035951001 No alias 29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH 0.12 Gene family
Smo119009 PACid_15408236 No description available 0.08 Gene family
Solyc04g076390.3.1 Solyc04g076390.3 29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004817 cysteine-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005737 cytoplasm IEA InterProScan
BP GO:0006423 cysteinyl-tRNA aminoacylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032678 tRNA-synt_1_cat_dom 91 382
IPR015273 Cys-tRNA-synt_Ia_DALR 425 488
No external refs found!