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  5. Smo410877

Smo410877 (SPD1)


Aliases : SPD1

No description available


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo410877
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g088713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03538 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene71144.t1 SPD1, Aspi01Gene71144 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18471 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10727 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10433691g0010 SPD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g08022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000530_P004 Zm00001e000530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 152 238
No external refs found!