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  5. Smo406902

Smo406902


Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo406902

Target Alias Description ECC score Gene Family Method Actions
AT1G78280 No alias transferases, transferring glycosyl groups 0.03 OrthoFinder output from all 47 species
Adi_g009966 No alias histone demethylase *(JMJD6) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19075 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g06080.1 No alias transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Pnu_g02785 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16258 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g074490.3.1 Solyc04g074490 transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 226 339
No external refs found!