LOC_Os09g36770 (Os09g0538800)

Aliases : Os09g0538800

Description : 35.1.19 not assigned.no ontology.C2 domain-containing protein Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. synaptotagmin A (SYTA)

Gene families : OG_01_0000216 (Gene family) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g36770
Cluster HCCA cluster: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Cre12.g559450 No alias No description available 0.02 Gene family
MA_10435546g0010 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
Solyc12g009790.2.1 Solyc12g009790.2 35.1.19 not assigned.no ontology.C2 domain-containing... 0.02 Gene family
Zm00001d028437 GRMZM2G359879 30.3 signalling.calcium NTMC2T4 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 248
IPR000008 C2_dom 260 357
IPR000008 C2_dom 420 522
No external refs found!