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  5. Smo405724

Smo405724 (GC1)


Aliases : GC1

Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC1-type golgin


Gene families : OG0005613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo405724
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT2G19950 GC1 golgin candidate 1 0.03 OrthoFinder output from all 47 species
Aev_g18873 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g08195 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g27897 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G051800.1 GC1, Ceric.01G051800 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
Cre12.g517500 GC1 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g03994 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g54119.1 GC1, LOC_Os01g54119 golgin (GC1) 0.02 OrthoFinder output from all 47 species
Ore_g36297 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g02316 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g008390.3.1 GC1, Solyc12g008390 golgin (GC1) 0.06 OrthoFinder output from all 47 species
Tin_g01154 GC1 Golgin-type membrane tethering protein *(GC1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e019844_P001 GC1, Zm00001e019844 golgin (GC1) 0.04 OrthoFinder output from all 47 species
Zm00001e029063_P003 GC1, Zm00001e029063 golgin (GC1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007030 Golgi organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR019177 Golgin_subfamily_A_member_5 294 564
No external refs found!