LOC_Os02g56020.1

Description : rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)

Gene families : OG_01_0005359 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005359_tree ,
OG_02_0006627 (LandPlants) Phylogenetic Tree(s): OG_02_0006627_tree ,
OG_03_0006375 (SeedPlants) Phylogenetic Tree(s): OG_03_0006375_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g56020.1
Cluster	HCCA: Cluster_353

Target	Alias	Description	ECC score	Gene Family Method
AT5G57280	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	Archaeplastida
Cre09.g398104	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.03	Archaeplastida
GSVIVT01010906001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.02	Archaeplastida
Mp4g23300.1	No alias	rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)	0.05	Archaeplastida
Pp3c12_7620V3.1	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	Archaeplastida
Solyc06g072250.3.1	No alias	rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)	0.04	Archaeplastida
Zm00001e016154_P002	No alias	no hits & (original description: none)	0.05	Archaeplastida
AT5G57280	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	LandPlants
GSVIVT01010906001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.02	LandPlants
Mp4g23300.1	No alias	rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)	0.05	LandPlants
Pp3c12_7620V3.1	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	LandPlants
Solyc06g072250.3.1	No alias	rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)	0.04	LandPlants
Zm00001e016154_P002	No alias	no hits & (original description: none)	0.04	LandPlants
AT5G57280	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.03	SeedPlants
GSVIVT01010906001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.02	SeedPlants
Solyc06g072250.3.1	No alias	rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)	0.04	SeedPlants
Zm00001e016154_P002	No alias	no hits & (original description: none)	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	None	Extended
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008649	rRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0031167	rRNA methylation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0036265	RNA (guanine-N7)-methylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0070475	rRNA base methylation	None	Extended
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140102	catalytic activity, acting on a rRNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013216	Methyltransf_11	166	268
IPR022238	Bud23_C	312	403

External Links

No external refs found!

LOC_Os02g56020.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation